revise.config.runner\_conf.ApplicationScSrConf
==============================================

.. currentmodule:: revise.config.runner_conf

.. autoclass:: ApplicationScSrConf

   
   .. automethod:: __init__

   
   .. rubric:: Methods

   .. autosummary::
   
      ~ApplicationScSrConf.__init__
   
   

   
   
   .. rubric:: Attributes

   .. autosummary::
   
      ~ApplicationScSrConf.annotate_mode
      ~ApplicationScSrConf.annotate_pot_reg
      ~ApplicationScSrConf.annotate_pot_reg_m
      ~ApplicationScSrConf.annotate_pot_reg_type
      ~ApplicationScSrConf.pm_on_cell_file
      ~ApplicationScSrConf.prep_sc_min_cells
      ~ApplicationScSrConf.prep_sc_min_counts
      ~ApplicationScSrConf.prep_st_min_cells
      ~ApplicationScSrConf.prep_st_min_counts
      ~ApplicationScSrConf.rec_alpha
      ~ApplicationScSrConf.rec_graph_alpha
      ~ApplicationScSrConf.rec_graph_exp_neighbor_num
      ~ApplicationScSrConf.rec_graph_method
      ~ApplicationScSrConf.rec_graph_n_neighbors
      ~ApplicationScSrConf.rec_graph_spatial_neighbor_num
      ~ApplicationScSrConf.rec_match_spot_sum
      ~ApplicationScSrConf.rec_pot_reg
      ~ApplicationScSrConf.rec_pot_reg_m
      ~ApplicationScSrConf.rec_pot_reg_type
      ~ApplicationScSrConf.result_dir
      ~ApplicationScSrConf.sc_ref_file_path
      ~ApplicationScSrConf.st_file_path
      ~ApplicationScSrConf.svc_completeness
      ~ApplicationScSrConf.st_file
      ~ApplicationScSrConf.sc_ref_file
      ~ApplicationScSrConf.sample_name
      ~ApplicationScSrConf.raw_data_path
      ~ApplicationScSrConf.result_root_path
      ~ApplicationScSrConf.cell_type_col
      ~ApplicationScSrConf.confidence_col
      ~ApplicationScSrConf.unknown_key