revise.config.runner\_conf.ApplicationScConf
============================================

.. currentmodule:: revise.config.runner_conf

.. autoclass:: ApplicationScConf

   
   .. automethod:: __init__

   
   .. rubric:: Methods

   .. autosummary::
   
      ~ApplicationScConf.__init__
   
   

   
   
   .. rubric:: Attributes

   .. autosummary::
   
      ~ApplicationScConf.annotate_mode
      ~ApplicationScConf.annotate_pot_reg
      ~ApplicationScConf.annotate_pot_reg_m
      ~ApplicationScConf.annotate_pot_reg_type
      ~ApplicationScConf.prep_sc_min_cells
      ~ApplicationScConf.prep_sc_min_counts
      ~ApplicationScConf.prep_st_min_cells
      ~ApplicationScConf.prep_st_min_counts
      ~ApplicationScConf.rec_alpha
      ~ApplicationScConf.rec_graph_alpha
      ~ApplicationScConf.rec_graph_exp_neighbor_num
      ~ApplicationScConf.rec_graph_method
      ~ApplicationScConf.rec_graph_n_neighbors
      ~ApplicationScConf.rec_graph_spatial_neighbor_num
      ~ApplicationScConf.rec_match_spot_sum
      ~ApplicationScConf.rec_pot_reg
      ~ApplicationScConf.rec_pot_reg_m
      ~ApplicationScConf.rec_pot_reg_type
      ~ApplicationScConf.result_dir
      ~ApplicationScConf.sc_ref_file_path
      ~ApplicationScConf.st_file_path
      ~ApplicationScConf.st_file
      ~ApplicationScConf.sc_ref_file
      ~ApplicationScConf.sample_name
      ~ApplicationScConf.raw_data_path
      ~ApplicationScConf.result_root_path
      ~ApplicationScConf.cell_type_col
      ~ApplicationScConf.confidence_col
      ~ApplicationScConf.unknown_key